STRINGSTRING
pcaG pcaG pcaH pcaH AGE24801.1 AGE24801.1 pobA pobA pcaC pcaC AGE24796.1 AGE24796.1 AGE24795.1 AGE24795.1 pcaD pcaD AGE25835.1 AGE25835.1 AGE27512.1 AGE27512.1 pcaF pcaF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
pcaGCOG3485 Protocatechuate 3,4-dioxygenase beta subunit. (188 aa)    
Predicted Functional Partners:
pcaH
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
0.999
AGE24801.1
3-carboxy-cis,cis-muconate cycloisomerase; COG0015 Adenylosuccinate lyase.
 
 
 0.989
pobA
4-hydroxybenzoate 3-monooxygenase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
 
  
 0.981
pcaC
4-carboxymuconolactone decarboxylase; COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
 
  
 0.891
AGE24796.1
COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
 
  
 0.877
AGE24795.1
COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
 
  
 0.873
pcaD
Putative aromatic-hydrocarbons degradation-related hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
   
 0.823
AGE25835.1
Catechol 1,2-dioxygenase; COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
  
   
 0.782
AGE27512.1
4-hydroxyphenylpyruvate dioxygenase; COG1082 Sugar phosphate isomerases/epimerases.
 
   
 0.776
pcaF
Beta-ketoadipyl CoA thiolase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.746
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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