STRINGSTRING
AGE24850.1 AGE24850.1 mmsB mmsB AGE25904.1 AGE25904.1 AGE26048.1 AGE26048.1 AGE25901.1 AGE25901.1 AGE25903.1 AGE25903.1 AGE26381.1 AGE26381.1 AGE26379.1 AGE26379.1 AGE28385.1 AGE28385.1 ung ung AGE25215.1 AGE25215.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGE24850.1COG1024 Enoyl-CoA hydratase/carnithine racemase. (370 aa)    
Predicted Functional Partners:
mmsB
COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; Belongs to the HIBADH-related family.
  
 0.819
AGE25904.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.759
AGE26048.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.759
AGE25901.1
Putative non-ribosomal antibiotic-related peptide synthase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 
 0.691
AGE25903.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.687
AGE26381.1
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
    0.656
AGE26379.1
COG1960 Acyl-CoA dehydrogenases.
 
 0.650
AGE28385.1
COG1960 Acyl-CoA dehydrogenases.
 
 0.645
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
     
 0.633
AGE25215.1
P-hydroxycinnamoyl CoA hydratase/lyase; COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 
 0.633
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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