STRINGSTRING
algU algU AGE24865.1 AGE24865.1 AGE24866.1 AGE24866.1 AGE24867.1 AGE24867.1 AGE25901.1 AGE25901.1 AGE26389.1 AGE26389.1 AGE25904.1 AGE25904.1 AGE26048.1 AGE26048.1 AGE26390.1 AGE26390.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
algUCOG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (193 aa)    
Predicted Functional Partners:
AGE24865.1
Sigma factor negative regulatory protein; COG3073 Negative regulator of sigma E activity.
  
 
 0.967
AGE24866.1
Sigma E regulatory protein MucB/RseB; COG3026 Negative regulator of sigma E activity.
 
 
 0.886
AGE24867.1
Putative exported heat-shock adaptation serine protease; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family.
     
 0.543
AGE25901.1
Putative non-ribosomal antibiotic-related peptide synthase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
  
 0.480
AGE26389.1
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
   
 0.478
AGE25904.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.460
AGE26048.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.460
AGE26390.1
COG5662 Predicted transmembrane transcriptional regulator (anti-sigma factor).
  
 
 0.446
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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