STRINGSTRING
AGE24891.1 AGE24891.1 AGE24892.1 AGE24892.1 AGE25060.1 AGE25060.1 AGE24129.1 AGE24129.1 AGE25319.1 AGE25319.1 AGE25512.1 AGE25512.1 AGE24890.1 AGE24890.1 AGE24196.1 AGE24196.1 AGE24893.1 AGE24893.1 AGE25460.1 AGE25460.1 dkgB dkgB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE24891.1Hypothetical protein; COG2910 Putative NADH-flavin reductase. (204 aa)    
Predicted Functional Partners:
AGE24892.1
COG0491 Zn-dependent hydrolases, including glyoxylases.
  
    0.712
AGE25060.1
Hypothetical protein; COG2388 Predicted acetyltransferase.
   
    0.639
AGE24129.1
COG3593 Predicted ATP-dependent endonuclease of the OLD family.
   
    0.635
AGE25319.1
Permease family protein; COG0701 Predicted permeases.
   
    0.635
AGE25512.1
COG1733 Predicted transcriptional regulators.
 
  
 0.596
AGE24890.1
Putative transporter-like membrane protein; COG2807 Cyanate permease.
 
     0.586
AGE24196.1
Hypothetical protein; COG1090 Predicted nucleoside-diphosphate sugar epimerase.
   
    0.474
AGE24893.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.473
AGE25460.1
Pyruvate dehydrogenase; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; Belongs to the TPP enzyme family.
  
    0.462
dkgB
2,5-diketo-D-gluconate reductase B; COG0656 Aldo/keto reductases, related to diketogulonate reductase.
 
  
 0.452
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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