STRINGSTRING
AGE24893.1 AGE24893.1 AGE25230.1 AGE25230.1 AGE27880.1 AGE27880.1 AGE27051.1 AGE27051.1 AGE24966.1 AGE24966.1 AGE25660.1 AGE25660.1 AGE28322.1 AGE28322.1 AGE24892.1 AGE24892.1 AGE25072.1 AGE25072.1 AGE24971.1 AGE24971.1 AGE25649.1 AGE25649.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE24893.1COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (301 aa)    
Predicted Functional Partners:
AGE25230.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.722
AGE27880.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.712
AGE27051.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.699
AGE24966.1
COG0583 Transcriptional regulator.
  
     0.684
AGE25660.1
COG0583 Transcriptional regulator.
  
     0.681
AGE28322.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.649
AGE24892.1
COG0491 Zn-dependent hydrolases, including glyoxylases.
 
  
 0.639
AGE25072.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.604
AGE24971.1
COG0583 Transcriptional regulator.
  
     0.594
AGE25649.1
COG0583 Transcriptional regulator.
  
     0.583
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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