STRINGSTRING
AGE24903.1 AGE24903.1 serC serC AGE27237.1 AGE27237.1 AGE24904.1 AGE24904.1 AGE24296.1 AGE24296.1 rnd rnd AGE24902.1 AGE24902.1 AGE24905.1 AGE24905.1 AGE25904.1 AGE25904.1 AGE26048.1 AGE26048.1 AGE25903.1 AGE25903.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE24903.1COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases. (310 aa)    
Predicted Functional Partners:
serC
3-phosphoserine/phosphohydroxythreonine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
  
 
 0.647
AGE27237.1
COG0460 Homoserine dehydrogenase.
  
 
 0.640
AGE24904.1
Hypothetical protein; Belongs to the UPF0260 family.
 
     0.627
AGE24296.1
Maf-like protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
   0.561
rnd
Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.
     
 0.555
AGE24902.1
YcgL domain protein; COG3100 Uncharacterized protein conserved in bacteria.
       0.552
AGE24905.1
Hypothetical protein; COG3975 Predicted protease with the C-terminal PDZ domain.
       0.551
AGE25904.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.538
AGE26048.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.538
AGE25903.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.495
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.