STRINGSTRING
AGE24940.1 AGE24940.1 nagZ nagZ AGE26797.1 AGE26797.1 lexA lexA AGE24938.1 AGE24938.1 AGE27179.1 AGE27179.1 AGE24694.1 AGE24694.1 AGE25772.1 AGE25772.1 AGE25730.1 AGE25730.1 AGE25904.1 AGE25904.1 AGE26048.1 AGE26048.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AGE24940.1COG1309 Transcriptional regulator. (235 aa)    
Predicted Functional Partners:
nagZ
Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
     
 0.530
AGE26797.1
COG3198 Uncharacterized protein conserved in bacteria.
  
    0.488
lexA
LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
     
 0.486
AGE24938.1
Cell division inhibitor; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division.
       0.484
AGE27179.1
Putative transcriptional regulator.
  
   
 0.460
AGE24694.1
Hypothetical protein.
  
     0.440
AGE25772.1
Putative regulatory protein.
  
     0.429
AGE25730.1
Hypothetical protein; COG0464 ATPases of the AAA+ class.
  
     0.426
AGE25904.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
     
 0.416
AGE26048.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
     
 0.416
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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