STRINGSTRING
AGE25028.1 AGE25028.1 AGE24228.1 AGE24228.1 AGE26282.1 AGE26282.1 AGE24229.1 AGE24229.1 gspF gspF AGE27635.1 AGE27635.1 dprA dprA gspE gspE AGE28005.1 AGE28005.1 AGE27753.1 AGE27753.1 AGE26528.1 AGE26528.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE25028.1COG1555 DNA uptake protein and related DNA-binding proteins. (110 aa)    
Predicted Functional Partners:
AGE24228.1
Type IV prepilin-like proteins leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
   
  
 0.692
AGE26282.1
DNA internalization-related competence protein ComEC/Rec2; COG0658 Predicted membrane metal-binding protein.
  
  
 0.656
AGE24229.1
Type IV pilus biogenesis protein PilC; COG1459 Type II secretory pathway, component PulF.
  
  
 0.582
gspF
General secretion pathway protein F; COG1459 Type II secretory pathway, component PulF.
  
  
 0.582
AGE27635.1
Single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
  
  
 0.559
dprA
Hypothetical protein; COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake.
 
  
 0.558
gspE
General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
  
 0.543
AGE28005.1
Putative secretion-related ATP-binding protein; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
  
 0.543
AGE27753.1
ComF family protein; COG1040 Predicted amidophosphoribosyltransferases.
  
  
 0.540
AGE26528.1
Sensor histidine kinase; COG2202 FOG: PAS/PAC domain.
  
  
 0.534
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.