STRINGSTRING
AGE25295.1 AGE25295.1 codB codB upp upp AGE25839.1 AGE25839.1 AGE26183.1 AGE26183.1 AGE27904.1 AGE27904.1 AGE24977.1 AGE24977.1 ppnP ppnP AGE26970.1 AGE26970.1 cytX cytX
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGE25295.1COG0402 Cytosine deaminase and related metal-dependent hydrolases. (413 aa)    
Predicted Functional Partners:
codB
COG1457 Purine-cytosine permease and related proteins.
 
  
 0.949
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
 
 0.944
AGE25839.1
Flavin reductase domain-containing protein; COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
  
  
  0.911
AGE26183.1
COG1402 Uncharacterized protein, putative amidase.
    
  0.911
AGE27904.1
COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase.
    
 0.909
AGE24977.1
Hypothetical protein; COG1611 Predicted Rossmann fold nucleotide-binding protein.
    
  0.902
ppnP
Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
     
  0.900
AGE26970.1
Putative transmembrane protein; COG1457 Purine-cytosine permease and related proteins; Belongs to the purine-cytosine permease (2.A.39) family.
 
  
 0.507
cytX
Permease for cytosine/purines,uracil,thiamine,allantoin family protein; COG1457 Purine-cytosine permease and related proteins.
 
  
 0.507
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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