STRINGSTRING
AGE25442.1 AGE25442.1 AGE25441.1 AGE25441.1 AGE28134.1 AGE28134.1 AGE25440.1 AGE25440.1 AGE25439.1 AGE25439.1 AGE25436.1 AGE25436.1 AGE25438.1 AGE25438.1 AGE25437.1 AGE25437.1 AGE25434.1 AGE25434.1 AGE25432.1 AGE25432.1 AGE25435.1 AGE25435.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE25442.1Serine-threonine kinase Stk1; COG0515 Serine/threonine protein kinase. (278 aa)    
Predicted Functional Partners:
AGE25441.1
COG0631 Serine/threonine protein phosphatase.
 
 
 0.970
AGE28134.1
Putative phosphatase; COG0631 Serine/threonine protein phosphatase.
 
 
 0.872
AGE25440.1
Type VI secretion protein IcmF; COG3523 Uncharacterized protein conserved in bacteria.
 
  
 0.869
AGE25439.1
Putative outer membrane protein; COG3455 Uncharacterized protein conserved in bacteria.
 
    0.800
AGE25436.1
Type VI secretion protein Fha2; COG3456 Uncharacterized conserved protein, contains FHA domain.
 
  
 0.780
AGE25438.1
Type VI secretion protein TssK2; COG3522 Uncharacterized protein conserved in bacteria.
 
  
 0.765
AGE25437.1
Type VI secretion lipoprotein TssJ2; COG3521 Uncharacterized protein conserved in bacteria.
 
  
 0.723
AGE25434.1
Sigma-54 dependent transcriptional regulator, Fis family protein; COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains.
 
 
 0.696
AGE25432.1
Type VI secretion protein TssG2; COG3520 Uncharacterized protein conserved in bacteria.
 
  
 0.637
AGE25435.1
Type VI secretion-associated lipoprotein TagU.
  
    0.617
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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