STRINGSTRING
AGE25597.1 AGE25597.1 AGE25596.1 AGE25596.1 AGE25833.1 AGE25833.1 AGE28423.1 AGE28423.1 AGE28425.1 AGE28425.1 AGE25826.1 AGE25826.1 AGE25832.1 AGE25832.1 AGE28422.1 AGE28422.1 AGE28426.1 AGE28426.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE25597.1COG3039 Transposase and inactivated derivatives, IS5 family. (326 aa)    
Predicted Functional Partners:
AGE25596.1
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
       0.515
AGE25833.1
COG2963 Transposase and inactivated derivatives.
  
     0.507
AGE28423.1
COG2963 Transposase and inactivated derivatives.
  
     0.505
AGE28425.1
COG2963 Transposase and inactivated derivatives.
  
     0.505
AGE25826.1
Hypothetical protein; COG2963 Transposase and inactivated derivatives.
  
     0.467
AGE25832.1
Putative transposase for insertion element; COG2801 Transposase and inactivated derivatives.
 
     0.409
AGE28422.1
Putative transposase for insertion element; COG2801 Transposase and inactivated derivatives.
 
     0.402
AGE28426.1
Putative transposase for insertion element; COG2801 Transposase and inactivated derivatives.
 
     0.402
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
Server load: low (20%) [HD]