STRINGSTRING
AGE25695.1 AGE25695.1 AGE24272.1 AGE24272.1 AGE27781.1 AGE27781.1 AGE27782.1 AGE27782.1 AGE27783.1 AGE27783.1 AGE25852.1 AGE25852.1 AGE25655.1 AGE25655.1 AGE27784.1 AGE27784.1 AGE26956.1 AGE26956.1 AGE27788.1 AGE27788.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE25695.1COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain. (327 aa)    
Predicted Functional Partners:
AGE24272.1
COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain.
  
     0.689
AGE27781.1
COG4583 Sarcosine oxidase gamma subunit.
 
    0.624
AGE27782.1
Sarcosine oxidase subunit alpha; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
 
     0.610
AGE27783.1
COG4311 Sarcosine oxidase delta subunit.
 
    0.606
AGE25852.1
DNA-binding transcriptional activator FeaR; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.595
AGE25655.1
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.582
AGE27784.1
Sarcosine oxidase subunit beta; COG0665 Glycine/D-amino acid oxidases (deaminating).
  
     0.507
AGE26956.1
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.501
AGE27788.1
Hybrid-cluster NAD(P)-dependent oxidoreductase; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
    0.402
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
Server load: low (16%) [HD]