STRINGSTRING
AGE25698.1 AGE25698.1 AGE25696.1 AGE25696.1 AGE25697.1 AGE25697.1 proC proC AGE25699.1 AGE25699.1 AGE26142.1 AGE26142.1 AGE26012.1 AGE26012.1 AGE26531.1 AGE26531.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE25698.1COG3938 Proline racemase; Belongs to the proline racemase family. (315 aa)    
Predicted Functional Partners:
AGE25696.1
FAD dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating).
 
  
 0.990
AGE25697.1
COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
 
  
 0.936
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
 0.921
AGE25699.1
AraC family transcriptional regulator; COG2202 FOG: PAS/PAC domain.
 
     0.835
AGE26142.1
COG1012 NAD-dependent aldehyde dehydrogenases.
 
 
 0.675
AGE26012.1
COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family.
 
   
 0.471
AGE26531.1
TspO/MBR family protein; COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog).
   
    0.469
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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