STRINGSTRING
AGE25802.1 AGE25802.1 AGE25803.1 AGE25803.1 AGE25801.1 AGE25801.1 fadB fadB AGE25024.1 AGE25024.1 AGE26953.1 AGE26953.1 AGE27791.1 AGE27791.1 AGE25076.1 AGE25076.1 AGE25799.1 AGE25799.1 nuoC nuoC AGE26954.1 AGE26954.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
AGE25802.1COG1960 Acyl-CoA dehydrogenases. (383 aa)    
Predicted Functional Partners:
AGE25803.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.913
AGE25801.1
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.891
fadB
Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.890
AGE25024.1
COG1250 3-hydroxyacyl-CoA dehydrogenase.
 
 0.833
AGE26953.1
COG2025 Electron transfer flavoprotein, alpha subunit.
 
 0.825
AGE27791.1
COG2025 Electron transfer flavoprotein, alpha subunit.
 
 
 0.758
AGE25076.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.741
AGE25799.1
COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.717
nuoC
Bifunctional NADH:ubiquinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
 0.709
AGE26954.1
COG2086 Electron transfer flavoprotein, beta subunit.
 
 
 0.705
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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