Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGE25840.1 | AGE25842.1 | H045_08850 | H045_08860 | Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | COG5517 Small subunit of phenylpropionate dioxygenase. | 0.920 |
AGE25840.1 | AGE25844.1 | H045_08850 | H045_08870 | Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | Hypothetical protein. | 0.826 |
AGE25840.1 | AGE25845.1 | H045_08850 | H045_08875 | Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | COG1960 Acyl-CoA dehydrogenases. | 0.805 |
AGE25840.1 | AGE25847.1 | H045_08850 | H045_08885 | Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | Hypothetical protein. | 0.648 |
AGE25840.1 | AGE25849.1 | H045_08850 | H045_08895 | Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | COG1846 Transcriptional regulators. | 0.623 |
AGE25840.1 | AGE25858.1 | H045_08850 | H045_08940 | Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | COG5517 Small subunit of phenylpropionate dioxygenase. | 0.806 |
AGE25840.1 | AGE25859.1 | H045_08850 | H045_08945 | Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | Rieske (2Fe-2S) domain-containing protein; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit. | 0.779 |
AGE25840.1 | AGE25862.1 | H045_08850 | H045_08960 | Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | Hypothetical protein. | 0.628 |
AGE25840.1 | AGE25874.1 | H045_08850 | H045_09020 | Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | acyl-CoA dehydrogenase type 2 domain protein; COG1960 Acyl-CoA dehydrogenases. | 0.572 |
AGE25842.1 | AGE25840.1 | H045_08860 | H045_08850 | COG5517 Small subunit of phenylpropionate dioxygenase. | Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | 0.920 |
AGE25842.1 | AGE25844.1 | H045_08860 | H045_08870 | COG5517 Small subunit of phenylpropionate dioxygenase. | Hypothetical protein. | 0.933 |
AGE25842.1 | AGE25845.1 | H045_08860 | H045_08875 | COG5517 Small subunit of phenylpropionate dioxygenase. | COG1960 Acyl-CoA dehydrogenases. | 0.923 |
AGE25842.1 | AGE25847.1 | H045_08860 | H045_08885 | COG5517 Small subunit of phenylpropionate dioxygenase. | Hypothetical protein. | 0.791 |
AGE25842.1 | AGE25849.1 | H045_08860 | H045_08895 | COG5517 Small subunit of phenylpropionate dioxygenase. | COG1846 Transcriptional regulators. | 0.787 |
AGE25842.1 | AGE25859.1 | H045_08860 | H045_08945 | COG5517 Small subunit of phenylpropionate dioxygenase. | Rieske (2Fe-2S) domain-containing protein; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit. | 0.934 |
AGE25842.1 | AGE25862.1 | H045_08860 | H045_08960 | COG5517 Small subunit of phenylpropionate dioxygenase. | Hypothetical protein. | 0.791 |
AGE25842.1 | AGE25869.1 | H045_08860 | H045_08995 | COG5517 Small subunit of phenylpropionate dioxygenase. | Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | 0.800 |
AGE25842.1 | AGE25874.1 | H045_08860 | H045_09020 | COG5517 Small subunit of phenylpropionate dioxygenase. | acyl-CoA dehydrogenase type 2 domain protein; COG1960 Acyl-CoA dehydrogenases. | 0.783 |
AGE25844.1 | AGE25840.1 | H045_08870 | H045_08850 | Hypothetical protein. | Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | 0.826 |
AGE25844.1 | AGE25842.1 | H045_08870 | H045_08860 | Hypothetical protein. | COG5517 Small subunit of phenylpropionate dioxygenase. | 0.933 |
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