STRINGSTRING
AGE25912.1 AGE25912.1 AGE24967.1 AGE24967.1 AGE25911.1 AGE25911.1 AGE26058.1 AGE26058.1 AGE24786.1 AGE24786.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AGE25912.1Putative protease; COG0826 Collagenase and related proteases. (659 aa)    
Predicted Functional Partners:
AGE24967.1
Hypothetical protein.
  
  
 0.720
AGE25911.1
Endoribonuclease L-PSP; COG0251 Putative translation initiation inhibitor, yjgF family.
       0.603
AGE26058.1
COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA; Belongs to the UPF0149 family.
 
     0.460
AGE24786.1
Hypothetical protein; COG0727 Predicted Fe-S-cluster oxidoreductase.
  
     0.410
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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