AGE25961.1 protein (Pseudomonas poae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

AGE25961.1

COG2133 Glucose/sorbosone dehydrogenases. (430 aa)

Predicted Functional Partners:

AGE25960.1

0.932

AGE25959.1

0.592

Your Current Organism:

Pseudomonas poae

NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGE25959.1	AGE25960.1	H045_09460	H045_09465	COG4294 UV damage repair endonuclease.	COG4244 Predicted membrane protein.	0.509
AGE25959.1	AGE25961.1	H045_09460	H045_09470	COG4294 UV damage repair endonuclease.	COG2133 Glucose/sorbosone dehydrogenases.	0.592
AGE25960.1	AGE25959.1	H045_09465	H045_09460	COG4244 Predicted membrane protein.	COG4294 UV damage repair endonuclease.	0.509
AGE25960.1	AGE25961.1	H045_09465	H045_09470	COG4244 Predicted membrane protein.	COG2133 Glucose/sorbosone dehydrogenases.	0.932
AGE25961.1	AGE25959.1	H045_09470	H045_09460	COG2133 Glucose/sorbosone dehydrogenases.	COG4294 UV damage repair endonuclease.	0.592
AGE25961.1	AGE25960.1	H045_09470	H045_09465	COG2133 Glucose/sorbosone dehydrogenases.	COG4244 Predicted membrane protein.	0.932