STRINGSTRING
AGE26028.1 AGE26028.1 AGE27215.1 AGE27215.1 AGE28696.1 AGE28696.1 AGE26029.1 AGE26029.1 AGE28695.1 AGE28695.1 AGE27966.1 AGE27966.1 AGE28699.1 AGE28699.1 AGE24505.1 AGE24505.1 AGE26027.1 AGE26027.1 AGE28731.1 AGE28731.1 AGE26766.1 AGE26766.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE26028.1Hypothetical protein; COG2194 Predicted membrane-associated, metal-dependent hydrolase. (580 aa)    
Predicted Functional Partners:
AGE27215.1
InaA protein.
  
     0.704
AGE28696.1
Lipopolysaccharide core heptose(I) kinase RfaP; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
  
     0.669
AGE26029.1
Putative ferric alcaligin siderophore receptor; COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid.
       0.500
AGE28695.1
Lipopolysaccharide core biosynthesis protein; COG0438 Glycosyltransferase.
  
     0.488
AGE27966.1
COG3204 Uncharacterized protein conserved in bacteria.
  
   
 0.483
AGE28699.1
COG0515 Serine/threonine protein kinase.
  
     0.478
AGE24505.1
TonB-dependent outermembrane ferric citrate receptor FecA; COG4772 Outer membrane receptor for Fe3+-dicitrate.
  
     0.473
AGE26027.1
Hypothetical protein.
       0.473
AGE28731.1
HAMP domain-containing protein; COG3726 Uncharacterized membrane protein affecting hemolysin expression.
  
     0.459
AGE26766.1
Hypothetical protein.
  
     0.451
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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