Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGE24198.1 | AGE26187.1 | H045_00610 | H045_10610 | Putative TonB-dependent exported protein; COG1629 Outer membrane receptor proteins, mostly Fe transport. | COG3503 Predicted membrane protein. | 0.419 |
AGE25607.1 | AGE26187.1 | H045_07685 | H045_10610 | Putative TonB-dependent receptor YncD; COG1629 Outer membrane receptor proteins, mostly Fe transport. | COG3503 Predicted membrane protein. | 0.407 |
AGE26147.1 | AGE26187.1 | H045_10410 | H045_10610 | Putative TonB-dependent siderophore receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport. | COG3503 Predicted membrane protein. | 0.618 |
AGE26186.1 | AGE26187.1 | H045_10605 | H045_10610 | COG0625 Glutathione S-transferase. | COG3503 Predicted membrane protein. | 0.518 |
AGE26187.1 | AGE24198.1 | H045_10610 | H045_00610 | COG3503 Predicted membrane protein. | Putative TonB-dependent exported protein; COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.419 |
AGE26187.1 | AGE25607.1 | H045_10610 | H045_07685 | COG3503 Predicted membrane protein. | Putative TonB-dependent receptor YncD; COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.407 |
AGE26187.1 | AGE26147.1 | H045_10610 | H045_10410 | COG3503 Predicted membrane protein. | Putative TonB-dependent siderophore receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.618 |
AGE26187.1 | AGE26186.1 | H045_10610 | H045_10605 | COG3503 Predicted membrane protein. | COG0625 Glutathione S-transferase. | 0.518 |
AGE26187.1 | folE2 | H045_10610 | H045_20810 | COG3503 Predicted membrane protein. | GTP cyclohydrolase; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.433 |
folE2 | AGE26187.1 | H045_20810 | H045_10610 | GTP cyclohydrolase; Converts GTP to 7,8-dihydroneopterin triphosphate. | COG3503 Predicted membrane protein. | 0.433 |