STRINGSTRING
AGE26366.1 AGE26366.1 emrB emrB AGE26367.1 AGE26367.1 AGE26368.1 AGE26368.1 AGE28397.1 AGE28397.1 AGE24392.1 AGE24392.1 AGE28407.1 AGE28407.1 AGE26435.1 AGE26435.1 AGE26424.1 AGE26424.1 AGE25599.1 AGE25599.1 AGE24809.1 AGE24809.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE26366.1COG1566 Multidrug resistance efflux pump. (400 aa)    
Predicted Functional Partners:
emrB
Multidrug resistance protein B; COG0477 Permeases of the major facilitator superfamily.
 
 
 0.981
AGE26367.1
COG1538 Outer membrane protein.
 
 
 0.929
AGE26368.1
COG1846 Transcriptional regulators.
 
  
 0.834
AGE28397.1
COG0477 Permeases of the major facilitator superfamily.
 
 0.797
AGE24392.1
Putative fusaric acid resistance protein; COG1538 Outer membrane protein.
 
 
 0.747
AGE28407.1
Putative lipoprotein; COG1538 Outer membrane protein.
 
 
 0.651
AGE26435.1
COG0477 Permeases of the major facilitator superfamily.
 
 
 0.650
AGE26424.1
Putative lipoprotein; COG1538 Outer membrane protein.
 
 
 0.620
AGE25599.1
Outer membrane component of multidrug efflux system; COG1538 Outer membrane protein.
 
 
 0.612
AGE24809.1
COG1538 Outer membrane protein.
 
 
 0.607
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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