Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGE27627.1 | pbpG | H045_17825 | H045_11770 | Endonuclease/exonuclease/phosphatase family protein; COG3568 Metal-dependent hydrolase. | COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.470 |
AGE28223.1 | AGE28744.1 | H045_20805 | H045_23430 | COG0860 N-acetylmuramoyl-L-alanine amidase. | COG0860 N-acetylmuramoyl-L-alanine amidase. | 0.943 |
AGE28223.1 | pbpG | H045_20805 | H045_11770 | COG0860 N-acetylmuramoyl-L-alanine amidase. | COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.413 |
AGE28369.1 | pbpG | H045_21535 | H045_11770 | COG2715 Uncharacterized membrane protein, required for spore maturation in B.subtilis. | COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.678 |
AGE28744.1 | AGE28223.1 | H045_23430 | H045_20805 | COG0860 N-acetylmuramoyl-L-alanine amidase. | COG0860 N-acetylmuramoyl-L-alanine amidase. | 0.943 |
AGE28744.1 | pbpG | H045_23430 | H045_11770 | COG0860 N-acetylmuramoyl-L-alanine amidase. | COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.413 |
folD | pbpG | H045_11765 | H045_11770 | Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | 0.516 |
pbpG | AGE27627.1 | H045_11770 | H045_17825 | COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | Endonuclease/exonuclease/phosphatase family protein; COG3568 Metal-dependent hydrolase. | 0.470 |
pbpG | AGE28223.1 | H045_11770 | H045_20805 | COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | COG0860 N-acetylmuramoyl-L-alanine amidase. | 0.413 |
pbpG | AGE28369.1 | H045_11770 | H045_21535 | COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | COG2715 Uncharacterized membrane protein, required for spore maturation in B.subtilis. | 0.678 |
pbpG | AGE28744.1 | H045_11770 | H045_23430 | COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | COG0860 N-acetylmuramoyl-L-alanine amidase. | 0.413 |
pbpG | folD | H045_11770 | H045_11765 | COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. | Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.516 |