Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGE24863.1 | AGE25017.1 | H045_03935 | H045_04705 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Asparagine synthetase (WbpS); COG0367 Asparagine synthase (glutamine-hydrolyzing). | 0.900 |
AGE24863.1 | AGE25019.1 | H045_03935 | H045_04715 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | COG0367 Asparagine synthase (glutamine-hydrolyzing). | 0.900 |
AGE24863.1 | AGE26479.1 | H045_03935 | H045_12070 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Glutaminase-asparaginase; COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; Belongs to the asparaginase 1 family. | 0.915 |
AGE24863.1 | AGE28193.1 | H045_03935 | H045_20655 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D. | 0.915 |
AGE24863.1 | argG | H045_03935 | H045_02670 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.917 |
AGE24863.1 | aspA | H045_03935 | H045_20645 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | COG1027 Aspartate ammonia-lyase. | 0.920 |
AGE25017.1 | AGE24863.1 | H045_04705 | H045_03935 | Asparagine synthetase (WbpS); COG0367 Asparagine synthase (glutamine-hydrolyzing). | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.900 |
AGE25017.1 | AGE25019.1 | H045_04705 | H045_04715 | Asparagine synthetase (WbpS); COG0367 Asparagine synthase (glutamine-hydrolyzing). | COG0367 Asparagine synthase (glutamine-hydrolyzing). | 0.977 |
AGE25017.1 | AGE26479.1 | H045_04705 | H045_12070 | Asparagine synthetase (WbpS); COG0367 Asparagine synthase (glutamine-hydrolyzing). | Glutaminase-asparaginase; COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; Belongs to the asparaginase 1 family. | 0.907 |
AGE25017.1 | AGE28193.1 | H045_04705 | H045_20655 | Asparagine synthetase (WbpS); COG0367 Asparagine synthase (glutamine-hydrolyzing). | COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D. | 0.907 |
AGE25017.1 | argG | H045_04705 | H045_02670 | Asparagine synthetase (WbpS); COG0367 Asparagine synthase (glutamine-hydrolyzing). | COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.917 |
AGE25017.1 | aspA | H045_04705 | H045_20645 | Asparagine synthetase (WbpS); COG0367 Asparagine synthase (glutamine-hydrolyzing). | COG1027 Aspartate ammonia-lyase. | 0.901 |
AGE25019.1 | AGE24863.1 | H045_04715 | H045_03935 | COG0367 Asparagine synthase (glutamine-hydrolyzing). | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.900 |
AGE25019.1 | AGE25017.1 | H045_04715 | H045_04705 | COG0367 Asparagine synthase (glutamine-hydrolyzing). | Asparagine synthetase (WbpS); COG0367 Asparagine synthase (glutamine-hydrolyzing). | 0.977 |
AGE25019.1 | AGE26479.1 | H045_04715 | H045_12070 | COG0367 Asparagine synthase (glutamine-hydrolyzing). | Glutaminase-asparaginase; COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; Belongs to the asparaginase 1 family. | 0.907 |
AGE25019.1 | AGE28193.1 | H045_04715 | H045_20655 | COG0367 Asparagine synthase (glutamine-hydrolyzing). | COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D. | 0.907 |
AGE25019.1 | argG | H045_04715 | H045_02670 | COG0367 Asparagine synthase (glutamine-hydrolyzing). | COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.917 |
AGE25019.1 | aspA | H045_04715 | H045_20645 | COG0367 Asparagine synthase (glutamine-hydrolyzing). | COG1027 Aspartate ammonia-lyase. | 0.901 |
AGE25986.1 | AGE26479.1 | H045_09595 | H045_12070 | COG2902 NAD-specific glutamate dehydrogenase. | Glutaminase-asparaginase; COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; Belongs to the asparaginase 1 family. | 0.912 |
AGE25986.1 | gltB | H045_09595 | H045_22950 | COG2902 NAD-specific glutamate dehydrogenase. | COG0067 Glutamate synthase domain 1. | 0.937 |
page 1 of 4