Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGE26559.1 | AGE26560.1 | H045_12470 | H045_12475 | OPT superfamily oligopeptide transporter; COG1297 Predicted membrane protein. | COG0840 Methyl-accepting chemotaxis protein. | 0.565 |
AGE26559.1 | astA | H045_12470 | H045_14820 | OPT superfamily oligopeptide transporter; COG1297 Predicted membrane protein. | COG3138 Arginine/ornithine N-succinyltransferase beta subunit. | 0.408 |
AGE26559.1 | astD | H045_12470 | H045_14815 | OPT superfamily oligopeptide transporter; COG1297 Predicted membrane protein. | Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | 0.404 |
AGE26559.1 | atpB | H045_12470 | H045_20980 | OPT superfamily oligopeptide transporter; COG1297 Predicted membrane protein. | F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.402 |
AGE26560.1 | AGE26559.1 | H045_12475 | H045_12470 | COG0840 Methyl-accepting chemotaxis protein. | OPT superfamily oligopeptide transporter; COG1297 Predicted membrane protein. | 0.565 |
astA | AGE26559.1 | H045_14820 | H045_12470 | COG3138 Arginine/ornithine N-succinyltransferase beta subunit. | OPT superfamily oligopeptide transporter; COG1297 Predicted membrane protein. | 0.408 |
astA | astD | H045_14820 | H045_14815 | COG3138 Arginine/ornithine N-succinyltransferase beta subunit. | Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | 0.984 |
astD | AGE26559.1 | H045_14815 | H045_12470 | Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | OPT superfamily oligopeptide transporter; COG1297 Predicted membrane protein. | 0.404 |
astD | astA | H045_14815 | H045_14820 | Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | COG3138 Arginine/ornithine N-succinyltransferase beta subunit. | 0.984 |
atpB | AGE26559.1 | H045_20980 | H045_12470 | F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | OPT superfamily oligopeptide transporter; COG1297 Predicted membrane protein. | 0.402 |