STRINGSTRING
AGE26624.1 AGE26624.1 AGE26646.1 AGE26646.1 AGE24082.1 AGE24082.1 AGE24081.1 AGE24081.1 AGE24080.1 AGE24080.1 AGE26623.1 AGE26623.1 AGE27528.1 AGE27528.1 AGE24844.1 AGE24844.1 AGE25672.1 AGE25672.1 AGE26534.1 AGE26534.1 AGE26171.1 AGE26171.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE26624.1Hypothetical protein; COG3248 Nucleoside-binding outer membrane protein. (261 aa)    
Predicted Functional Partners:
AGE26646.1
Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.636
AGE24082.1
Hypothetical protein.
  
     0.566
AGE24081.1
COG3095 Uncharacterized protein involved in chromosome partitioning.
  
     0.564
AGE24080.1
Hypothetical protein; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
  
     0.553
AGE26623.1
COG3748 Predicted membrane protein.
 
     0.546
AGE27528.1
Membrane protein.
  
     0.526
AGE24844.1
(R)-3-hydroxydecanoyl-ACP:CoA transacylase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.519
AGE25672.1
Putative helicase; COG0210 Superfamily I DNA and RNA helicases.
  
    0.494
AGE26534.1
MutT/NUDIX family hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
  
     0.482
AGE26171.1
Hypothetical protein.
  
     0.469
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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