Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGE26679.1 | flgA | H045_13070 | H045_14730 | COG3144 Flagellar hook-length control protein. | COG1261 Flagellar basal body P-ring biosynthesis protein. | 0.918 |
AGE26679.1 | flgB | H045_13070 | H045_14710 | COG3144 Flagellar hook-length control protein. | Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.956 |
AGE26679.1 | flgF | H045_13070 | H045_13205 | COG3144 Flagellar hook-length control protein. | COG4787 Flagellar basal body rod protein. | 0.977 |
AGE26679.1 | flgH | H045_13070 | H045_13195 | COG3144 Flagellar hook-length control protein. | Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.965 |
AGE26679.1 | flgI | H045_13070 | H045_13190 | COG3144 Flagellar hook-length control protein. | Flagellar basal body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.939 |
AGE26679.1 | flgJ | H045_13070 | H045_13185 | COG3144 Flagellar hook-length control protein. | Flagellar rod assembly protein/muramidase FlgJ; COG3951 Rod binding protein. | 0.989 |
AGE26679.1 | flgK | H045_13070 | H045_13180 | COG3144 Flagellar hook-length control protein. | COG1256 Flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family. | 0.945 |
AGE26679.1 | flgL | H045_13070 | H045_13175 | COG3144 Flagellar hook-length control protein. | COG1344 Flagellin and related hook-associated proteins. | 0.893 |
AGE26679.1 | fliL | H045_13070 | H045_13065 | COG3144 Flagellar hook-length control protein. | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.956 |
AGE26679.1 | fliO | H045_13070 | H045_13050 | COG3144 Flagellar hook-length control protein. | COG3190 Flagellar biogenesis protein. | 0.967 |
flgA | AGE26679.1 | H045_14730 | H045_13070 | COG1261 Flagellar basal body P-ring biosynthesis protein. | COG3144 Flagellar hook-length control protein. | 0.918 |
flgA | flgB | H045_14730 | H045_14710 | COG1261 Flagellar basal body P-ring biosynthesis protein. | Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.983 |
flgA | flgF | H045_14730 | H045_13205 | COG1261 Flagellar basal body P-ring biosynthesis protein. | COG4787 Flagellar basal body rod protein. | 0.964 |
flgA | flgH | H045_14730 | H045_13195 | COG1261 Flagellar basal body P-ring biosynthesis protein. | Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.985 |
flgA | flgI | H045_14730 | H045_13190 | COG1261 Flagellar basal body P-ring biosynthesis protein. | Flagellar basal body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.979 |
flgA | flgJ | H045_14730 | H045_13185 | COG1261 Flagellar basal body P-ring biosynthesis protein. | Flagellar rod assembly protein/muramidase FlgJ; COG3951 Rod binding protein. | 0.990 |
flgA | flgK | H045_14730 | H045_13180 | COG1261 Flagellar basal body P-ring biosynthesis protein. | COG1256 Flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family. | 0.982 |
flgA | flgL | H045_14730 | H045_13175 | COG1261 Flagellar basal body P-ring biosynthesis protein. | COG1344 Flagellin and related hook-associated proteins. | 0.941 |
flgA | fliL | H045_14730 | H045_13065 | COG1261 Flagellar basal body P-ring biosynthesis protein. | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.938 |
flgA | fliO | H045_14730 | H045_13050 | COG1261 Flagellar basal body P-ring biosynthesis protein. | COG3190 Flagellar biogenesis protein. | 0.957 |
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