STRINGSTRING
AGE26708.1 AGE26708.1 AGE24312.1 AGE24312.1 phhA phhA gcvP gcvP phhB phhB AGE26711.1 AGE26711.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
AGE26708.1Transcriptional regulation of aroF, aroG, tyrA and aromatic amino acid transport; COG3283 Transcriptional regulator of aromatic amino acids metabolism. (519 aa)    
Predicted Functional Partners:
AGE24312.1
RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
   
 0.768
phhA
COG3186 Phenylalanine-4-hydroxylase.
     
 0.558
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.526
phhB
COG2154 Pterin-4a-carbinolamine dehydratase.
     
 0.460
AGE26711.1
COG1448 Aspartate/tyrosine/aromatic aminotransferase.
     
 0.431
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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