STRINGSTRING
AGE26730.1 AGE26730.1 AGE26729.1 AGE26729.1 AGE26732.1 AGE26732.1 cobS cobS cobT cobT cobU cobU AGE26728.1 AGE26728.1 AGE26727.1 AGE26727.1 AGE27229.1 AGE27229.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGE26730.1COG1846 Transcriptional regulators. (134 aa)    
Predicted Functional Partners:
AGE26729.1
Putative transporter; COG0477 Permeases of the major facilitator superfamily.
 
     0.701
AGE26732.1
7 alpha-ribazole-5'-phosphate phosphatase; COG0406 Fructose-2,6-bisphosphatase.
  
  
 0.685
cobS
Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
       0.682
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
       0.682
cobU
Adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.
       0.682
AGE26728.1
Hypothetical protein.
       0.567
AGE26727.1
COG0386 Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
  
 0.559
AGE27229.1
Putative transmembrane acid tolerance protein; COG0392 Predicted integral membrane protein.
  
   
 0.416
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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