Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGE24845.1 | AGE26886.1 | H045_03845 | H045_14105 | Ribosomal small subunit pseudouridine synthase A; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family. | Putative hydrolase; COG0637 Predicted phosphatase/phosphohexomutase. | 0.516 |
AGE26886.1 | AGE24845.1 | H045_14105 | H045_03845 | Putative hydrolase; COG0637 Predicted phosphatase/phosphohexomutase. | Ribosomal small subunit pseudouridine synthase A; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family. | 0.516 |
AGE26886.1 | AGE27258.1 | H045_14105 | H045_15975 | Putative hydrolase; COG0637 Predicted phosphatase/phosphohexomutase. | PTS system transporter subunit IIBC; COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific. | 0.400 |
AGE26886.1 | AGE27401.1 | H045_14105 | H045_16690 | Putative hydrolase; COG0637 Predicted phosphatase/phosphohexomutase. | COG2187 Uncharacterized protein conserved in bacteria. | 0.564 |
AGE26886.1 | pfkB | H045_14105 | H045_00840 | Putative hydrolase; COG0637 Predicted phosphatase/phosphohexomutase. | 1-phosphofructokinase; COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family. | 0.468 |
AGE26886.1 | treS | H045_14105 | H045_07420 | Putative hydrolase; COG0637 Predicted phosphatase/phosphohexomutase. | Putative trehalose synthase protein; COG0366 Glycosidases. | 0.454 |
AGE27258.1 | AGE26886.1 | H045_15975 | H045_14105 | PTS system transporter subunit IIBC; COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific. | Putative hydrolase; COG0637 Predicted phosphatase/phosphohexomutase. | 0.400 |
AGE27258.1 | pfkB | H045_15975 | H045_00840 | PTS system transporter subunit IIBC; COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific. | 1-phosphofructokinase; COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family. | 0.723 |
AGE27258.1 | treS | H045_15975 | H045_07420 | PTS system transporter subunit IIBC; COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific. | Putative trehalose synthase protein; COG0366 Glycosidases. | 0.596 |
AGE27401.1 | AGE26886.1 | H045_16690 | H045_14105 | COG2187 Uncharacterized protein conserved in bacteria. | Putative hydrolase; COG0637 Predicted phosphatase/phosphohexomutase. | 0.564 |
AGE27401.1 | pfkB | H045_16690 | H045_00840 | COG2187 Uncharacterized protein conserved in bacteria. | 1-phosphofructokinase; COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family. | 0.426 |
pfkB | AGE26886.1 | H045_00840 | H045_14105 | 1-phosphofructokinase; COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family. | Putative hydrolase; COG0637 Predicted phosphatase/phosphohexomutase. | 0.468 |
pfkB | AGE27258.1 | H045_00840 | H045_15975 | 1-phosphofructokinase; COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family. | PTS system transporter subunit IIBC; COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific. | 0.723 |
pfkB | AGE27401.1 | H045_00840 | H045_16690 | 1-phosphofructokinase; COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family. | COG2187 Uncharacterized protein conserved in bacteria. | 0.426 |
treS | AGE26886.1 | H045_07420 | H045_14105 | Putative trehalose synthase protein; COG0366 Glycosidases. | Putative hydrolase; COG0637 Predicted phosphatase/phosphohexomutase. | 0.454 |
treS | AGE27258.1 | H045_07420 | H045_15975 | Putative trehalose synthase protein; COG0366 Glycosidases. | PTS system transporter subunit IIBC; COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific. | 0.596 |