STRINGSTRING
AGE27062.1 AGE27062.1 AGE27060.1 AGE27060.1 AGE25574.1 AGE25574.1 AGE27066.1 AGE27066.1 AGE28511.1 AGE28511.1 pxpA pxpA AGE24774.1 AGE24774.1 AGE28775.1 AGE28775.1 AGE27059.1 AGE27059.1 AGE25649.1 AGE25649.1 AGE25495.1 AGE25495.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE27062.1COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (305 aa)    
Predicted Functional Partners:
AGE27060.1
COG2049 Allophanate hydrolase subunit 1.
 
     0.792
AGE25574.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.678
AGE27066.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.675
AGE28511.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.667
pxpA
Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
     0.637
AGE24774.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.629
AGE28775.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.619
AGE27059.1
Histidine kinase inhibitor antagonist; COG1984 Allophanate hydrolase subunit 2.
 
     0.611
AGE25649.1
COG0583 Transcriptional regulator.
  
     0.610
AGE25495.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.591
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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