Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGE27102.1 | AGE27103.1 | H045_15185 | H045_15190 | Hypothetical protein. | Putative dehydrogenase; COG0451 Nucleoside-diphosphate-sugar epimerases. | 0.559 |
AGE27102.1 | argP | H045_15185 | H045_15195 | Hypothetical protein. | Chromosome replication initiation inhibitor protein; Controls the transcription of genes involved in arginine and lysine metabolism; Belongs to the LysR transcriptional regulatory family. | 0.479 |
AGE27103.1 | AGE27102.1 | H045_15190 | H045_15185 | Putative dehydrogenase; COG0451 Nucleoside-diphosphate-sugar epimerases. | Hypothetical protein. | 0.559 |
AGE27103.1 | AGE27105.1 | H045_15190 | H045_15200 | Putative dehydrogenase; COG0451 Nucleoside-diphosphate-sugar epimerases. | COG3602 Uncharacterized protein conserved in bacteria. | 0.512 |
AGE27103.1 | AGE27106.1 | H045_15190 | H045_15205 | Putative dehydrogenase; COG0451 Nucleoside-diphosphate-sugar epimerases. | Arginine exporter protein ArgO; COG1279 Lysine efflux permease. | 0.513 |
AGE27103.1 | AGE27107.1 | H045_15190 | H045_15210 | Putative dehydrogenase; COG0451 Nucleoside-diphosphate-sugar epimerases. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.597 |
AGE27103.1 | argP | H045_15190 | H045_15195 | Putative dehydrogenase; COG0451 Nucleoside-diphosphate-sugar epimerases. | Chromosome replication initiation inhibitor protein; Controls the transcription of genes involved in arginine and lysine metabolism; Belongs to the LysR transcriptional regulatory family. | 0.665 |
AGE27105.1 | AGE27103.1 | H045_15200 | H045_15190 | COG3602 Uncharacterized protein conserved in bacteria. | Putative dehydrogenase; COG0451 Nucleoside-diphosphate-sugar epimerases. | 0.512 |
AGE27105.1 | AGE27106.1 | H045_15200 | H045_15205 | COG3602 Uncharacterized protein conserved in bacteria. | Arginine exporter protein ArgO; COG1279 Lysine efflux permease. | 0.913 |
AGE27105.1 | AGE27107.1 | H045_15200 | H045_15210 | COG3602 Uncharacterized protein conserved in bacteria. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.506 |
AGE27105.1 | argP | H045_15200 | H045_15195 | COG3602 Uncharacterized protein conserved in bacteria. | Chromosome replication initiation inhibitor protein; Controls the transcription of genes involved in arginine and lysine metabolism; Belongs to the LysR transcriptional regulatory family. | 0.600 |
AGE27106.1 | AGE27103.1 | H045_15205 | H045_15190 | Arginine exporter protein ArgO; COG1279 Lysine efflux permease. | Putative dehydrogenase; COG0451 Nucleoside-diphosphate-sugar epimerases. | 0.513 |
AGE27106.1 | AGE27105.1 | H045_15205 | H045_15200 | Arginine exporter protein ArgO; COG1279 Lysine efflux permease. | COG3602 Uncharacterized protein conserved in bacteria. | 0.913 |
AGE27106.1 | AGE27107.1 | H045_15205 | H045_15210 | Arginine exporter protein ArgO; COG1279 Lysine efflux permease. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.520 |
AGE27106.1 | argP | H045_15205 | H045_15195 | Arginine exporter protein ArgO; COG1279 Lysine efflux permease. | Chromosome replication initiation inhibitor protein; Controls the transcription of genes involved in arginine and lysine metabolism; Belongs to the LysR transcriptional regulatory family. | 0.922 |
AGE27107.1 | AGE27103.1 | H045_15210 | H045_15190 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Putative dehydrogenase; COG0451 Nucleoside-diphosphate-sugar epimerases. | 0.597 |
AGE27107.1 | AGE27105.1 | H045_15210 | H045_15200 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | COG3602 Uncharacterized protein conserved in bacteria. | 0.506 |
AGE27107.1 | AGE27106.1 | H045_15210 | H045_15205 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Arginine exporter protein ArgO; COG1279 Lysine efflux permease. | 0.520 |
AGE27107.1 | argP | H045_15210 | H045_15195 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Chromosome replication initiation inhibitor protein; Controls the transcription of genes involved in arginine and lysine metabolism; Belongs to the LysR transcriptional regulatory family. | 0.424 |
argP | AGE27102.1 | H045_15195 | H045_15185 | Chromosome replication initiation inhibitor protein; Controls the transcription of genes involved in arginine and lysine metabolism; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.479 |
page 1 of 2