STRINGSTRING
AGE27112.1 AGE27112.1 AGE27113.1 AGE27113.1 AGE26048.1 AGE26048.1 AGE25904.1 AGE25904.1 AGE26115.1 AGE26115.1 AGE25901.1 AGE25901.1 AGE26114.1 AGE26114.1 AGE26233.1 AGE26233.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AGE27112.1AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. (352 aa)    
Predicted Functional Partners:
AGE27113.1
COG4323 Predicted membrane protein.
       0.575
AGE26048.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
 
   
 0.504
AGE25904.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
 
   
 0.501
AGE26115.1
Hypothetical protein; COG3687 Predicted metal-dependent hydrolase.
  
     0.484
AGE25901.1
Putative non-ribosomal antibiotic-related peptide synthase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
  
 0.448
AGE26114.1
COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.447
AGE26233.1
Putative phosphoglycerate mutase family protein; COG0406 Fructose-2,6-bisphosphatase.
  
     0.429
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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