Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGE24312.1 | AGE25388.1 | H045_01180 | H045_06580 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two-component system, chemotaxis family, CheB/CheR fusion protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | 0.435 |
| AGE24312.1 | AGE26528.1 | H045_01180 | H045_12315 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Sensor histidine kinase; COG2202 FOG: PAS/PAC domain. | 0.535 |
| AGE24312.1 | AGE27193.1 | H045_01180 | H045_15640 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | C4-dicarboxylate transport transcriptional regulatory protein DctD; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.767 |
| AGE24312.1 | AGE27594.1 | H045_01180 | H045_17660 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Putative two-component system sensor kinase; COG2203 FOG: GAF domain. | 0.538 |
| AGE24312.1 | AGE27823.1 | H045_01180 | H045_18805 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Putative GGDEF/EAL domain regulatory protein; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain. | 0.491 |
| AGE24312.1 | AGE28517.1 | H045_01180 | H045_22295 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.768 |
| AGE24586.1 | AGE25388.1 | H045_02550 | H045_06580 | COG0642 Signal transduction histidine kinase. | Two-component system, chemotaxis family, CheB/CheR fusion protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | 0.573 |
| AGE24586.1 | AGE26528.1 | H045_02550 | H045_12315 | COG0642 Signal transduction histidine kinase. | Sensor histidine kinase; COG2202 FOG: PAS/PAC domain. | 0.781 |
| AGE24586.1 | AGE27193.1 | H045_02550 | H045_15640 | COG0642 Signal transduction histidine kinase. | C4-dicarboxylate transport transcriptional regulatory protein DctD; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.603 |
| AGE24586.1 | AGE27594.1 | H045_02550 | H045_17660 | COG0642 Signal transduction histidine kinase. | Putative two-component system sensor kinase; COG2203 FOG: GAF domain. | 0.704 |
| AGE24586.1 | AGE28517.1 | H045_02550 | H045_22295 | COG0642 Signal transduction histidine kinase. | COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.562 |
| AGE24590.1 | AGE25388.1 | H045_02570 | H045_06580 | Putative two-component system sensor kinase; COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system. | Two-component system, chemotaxis family, CheB/CheR fusion protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | 0.527 |
| AGE24590.1 | AGE26528.1 | H045_02570 | H045_12315 | Putative two-component system sensor kinase; COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system. | Sensor histidine kinase; COG2202 FOG: PAS/PAC domain. | 0.710 |
| AGE24590.1 | AGE27193.1 | H045_02570 | H045_15640 | Putative two-component system sensor kinase; COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system. | C4-dicarboxylate transport transcriptional regulatory protein DctD; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.625 |
| AGE24590.1 | AGE28517.1 | H045_02570 | H045_22295 | Putative two-component system sensor kinase; COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system. | COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.629 |
| AGE25388.1 | AGE24312.1 | H045_06580 | H045_01180 | Two-component system, chemotaxis family, CheB/CheR fusion protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.435 |
| AGE25388.1 | AGE24586.1 | H045_06580 | H045_02550 | Two-component system, chemotaxis family, CheB/CheR fusion protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | COG0642 Signal transduction histidine kinase. | 0.573 |
| AGE25388.1 | AGE24590.1 | H045_06580 | H045_02570 | Two-component system, chemotaxis family, CheB/CheR fusion protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | Putative two-component system sensor kinase; COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system. | 0.527 |
| AGE25388.1 | AGE26528.1 | H045_06580 | H045_12315 | Two-component system, chemotaxis family, CheB/CheR fusion protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | Sensor histidine kinase; COG2202 FOG: PAS/PAC domain. | 0.995 |
| AGE25388.1 | AGE27192.1 | H045_06580 | H045_15635 | Two-component system, chemotaxis family, CheB/CheR fusion protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain. | C4-dicarboxylate transport sensor protein DctB; COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system. | 0.527 |
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