STRINGSTRING
AGE27207.1 AGE27207.1 AGE27329.1 AGE27329.1 bfr bfr bfr-2 bfr-2 AGE28792.1 AGE28792.1 hemH hemH cyoE cyoE AGE27206.1 AGE27206.1 AGE27205.1 AGE27205.1 AGE26645.1 AGE26645.1 AGE27208.1 AGE27208.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGE27207.1Heme utilization protein; COG3230 Heme oxygenase. (202 aa)    
Predicted Functional Partners:
AGE27329.1
COG3230 Heme oxygenase.
  
  
 0.935
bfr
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
     
 0.901
bfr-2
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
     
 0.901
AGE28792.1
COG2193 Bacterioferritin (cytochrome b1).
     
 0.901
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
  0.900
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
     
  0.900
AGE27206.1
TonB-dependent outermembrane heme receptor PhuR; COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.791
AGE27205.1
Putative regulatory protein; COG3712 Fe2+-dicitrate sensor, membrane component.
 
  
 0.667
AGE26645.1
Extracytoplasmic-function sigma-70 factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.655
AGE27208.1
COG2832 Uncharacterized protein conserved in bacteria.
 
     0.649
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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