STRINGSTRING
AGE27283.1 AGE27283.1 AGE26017.1 AGE26017.1 xseA xseA AGE27285.1 AGE27285.1 AGE25103.1 AGE25103.1 AGE26554.1 AGE26554.1 AGE27282.1 AGE27282.1 AGE26021.1 AGE26021.1 AGE28050.1 AGE28050.1 AGE27870.1 AGE27870.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE27283.1Hypothetical protein; COG0730 Predicted permeases. (255 aa)    
Predicted Functional Partners:
AGE26017.1
Hypothetical protein.
  
     0.640
xseA
Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
       0.599
AGE27285.1
COG0739 Membrane proteins related to metalloendopeptidases.
       0.599
AGE25103.1
Hypothetical protein.
  
     0.572
AGE26554.1
COG1404 Subtilisin-like serine proteases.
  
     0.570
AGE27282.1
Hypothetical protein; COG3839 ABC-type sugar transport systems, ATPase components.
       0.541
AGE26021.1
Hypothetical protein.
 
     0.520
AGE28050.1
Alginate regulatory protein AlgP.
  
     0.449
AGE27870.1
Hypothetical protein.
  
     0.428
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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