STRINGSTRING
AGE27292.1 AGE27292.1 bamB bamB hisS hisS AGE27296.1 AGE27296.1 AGE24280.1 AGE24280.1 der der AGE27295.1 AGE27295.1 holA holA ispG ispG AGE28056.1 AGE28056.1 AGE28359.1 AGE28359.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AGE27292.1COG2976 Uncharacterized protein conserved in bacteria. (213 aa)    
Predicted Functional Partners:
bamB
Hypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
  
 0.960
hisS
COG0124 Histidyl-tRNA synthetase.
  
    0.884
AGE27296.1
Type IV pilus biogenesis/stability protein PilW; COG3063 Tfp pilus assembly protein PilF.
 
     0.756
AGE24280.1
ClpXP protease specificity-enhancing factor; COG2969 Stringent starvation protein B.
  
    0.736
der
GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
 
  
 0.709
AGE27295.1
Putative DNA-binding protein; COG1426 Uncharacterized protein conserved in bacteria.
 
    0.709
holA
COG1466 DNA polymerase III, delta subunit.
  
     0.696
ispG
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.
  
    0.685
AGE28056.1
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
     0.680
AGE28359.1
Thiol:disulfide interchange protein DsbA; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
     0.658
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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