Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGE24277.1 | AGE25885.1 | H045_01005 | H045_09075 | Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2. | 0.934 |
| AGE24277.1 | AGE25887.1 | H045_01005 | H045_09085 | Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | 0.935 |
| AGE24277.1 | AGE26332.1 | H045_01005 | H045_11335 | Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M). | 0.992 |
| AGE24277.1 | AGE27338.1 | H045_01005 | H045_16375 | Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | 0.935 |
| AGE24277.1 | cyoA | H045_01005 | H045_16385 | Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2. | 0.934 |
| AGE24277.1 | cyoB | H045_01005 | H045_16380 | Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.943 |
| AGE24277.1 | cyoE | H045_01005 | H045_16365 | Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.464 |
| AGE24277.1 | nuoC | H045_01005 | H045_11290 | Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Bifunctional NADH:ubiquinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family. | 0.966 |
| AGE25885.1 | AGE24277.1 | H045_09075 | H045_01005 | COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2. | Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.934 |
| AGE25885.1 | AGE25887.1 | H045_09075 | H045_09085 | COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2. | COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | 0.999 |
| AGE25885.1 | AGE25888.1 | H045_09075 | H045_09090 | COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2. | COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4. | 0.999 |
| AGE25885.1 | AGE26332.1 | H045_09075 | H045_11335 | COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2. | COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M). | 0.925 |
| AGE25885.1 | AGE27338.1 | H045_09075 | H045_16375 | COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2. | COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | 0.981 |
| AGE25885.1 | cyoA | H045_09075 | H045_16385 | COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2. | COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2. | 0.902 |
| AGE25885.1 | cyoB | H045_09075 | H045_16380 | COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2. | COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.981 |
| AGE25885.1 | cyoD | H045_09075 | H045_16370 | COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2. | COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4. | 0.968 |
| AGE25885.1 | cyoE | H045_09075 | H045_16365 | COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.922 |
| AGE25885.1 | nuoC | H045_09075 | H045_11290 | COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2. | Bifunctional NADH:ubiquinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family. | 0.987 |
| AGE25887.1 | AGE24277.1 | H045_09085 | H045_01005 | COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.935 |
| AGE25887.1 | AGE25885.1 | H045_09085 | H045_09075 | COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2. | 0.999 |
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