STRINGSTRING
AGE27488.1 AGE27488.1 AGE27487.1 AGE27487.1 putP putP AGE26721.1 AGE26721.1 AGE27486.1 AGE27486.1 putA putA AGE26760.1 AGE26760.1 AGE27489.1 AGE27489.1 AGE24090.1 AGE24090.1 AGE27413.1 AGE27413.1 AGE28666.1 AGE28666.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AGE27488.1COG1966 Carbon starvation protein, predicted membrane protein. (688 aa)    
Predicted Functional Partners:
AGE27487.1
COG2879 Uncharacterized small protein.
 
  
 0.981
putP
Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.656
AGE26721.1
Putative transmembrane two-component system, sensor kinase/regulator hybrid; COG0591 Na+/proline symporter.
  
  
 0.576
AGE27486.1
Putative cobalamin synthesis-like protein; COG0523 Putative GTPases (G3E family).
  
    0.552
putA
Trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
  
 0.552
AGE26760.1
Putative sodium/solute symporter; COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
    0.537
AGE27489.1
Hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein.
       0.524
AGE24090.1
Putative fatty acid transporter-like membrane protein; COG2031 Short chain fatty acids transporter.
  
     0.495
AGE27413.1
Putative two-component system sensor kinase; COG0591 Na+/proline symporter.
  
  
 0.494
AGE28666.1
AMP-binding protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.493
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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