STRINGSTRING
AGE27606.1 AGE27606.1 AGE26952.1 AGE26952.1 AGE28731.1 AGE28731.1 AGE27819.1 AGE27819.1 AGE27871.1 AGE27871.1 AGE27169.1 AGE27169.1 thiL thiL AGE28848.1 AGE28848.1 nusB nusB AGE25039.1 AGE25039.1 ribH ribH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGE27606.1Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. (241 aa)    
Predicted Functional Partners:
AGE26952.1
Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.730
AGE28731.1
HAMP domain-containing protein; COG3726 Uncharacterized membrane protein affecting hemolysin expression.
  
     0.721
AGE27819.1
Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.685
AGE27871.1
Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.660
AGE27169.1
Putative two-component system sensor kinase; COG0642 Signal transduction histidine kinase.
 
     0.654
thiL
Thiamine monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
       0.652
AGE28848.1
Lipoprotein.
  
     0.626
nusB
Transcription antitermination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
       0.622
AGE25039.1
Hypothetical protein.
  
     0.613
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.
       0.605
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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