Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGE24417.1 | AGE27721.1 | H045_01705 | H045_18295 | PhoH family protein; COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH. | PrkA family serine protein kinase; COG2766 Putative Ser protein kinase. | 0.491 |
AGE24417.1 | AGE27722.1 | H045_01705 | H045_18300 | PhoH family protein; COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH. | Hypothetical protein; Belongs to the UPF0229 family. | 0.431 |
AGE25094.1 | AGE27721.1 | H045_05090 | H045_18295 | Hypothetical protein. | PrkA family serine protein kinase; COG2766 Putative Ser protein kinase. | 0.678 |
AGE25094.1 | AGE27722.1 | H045_05090 | H045_18300 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0229 family. | 0.426 |
AGE25094.1 | AGE27723.1 | H045_05090 | H045_18305 | Hypothetical protein. | SpoVR family protein. | 0.465 |
AGE27721.1 | AGE24417.1 | H045_18295 | H045_01705 | PrkA family serine protein kinase; COG2766 Putative Ser protein kinase. | PhoH family protein; COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH. | 0.491 |
AGE27721.1 | AGE25094.1 | H045_18295 | H045_05090 | PrkA family serine protein kinase; COG2766 Putative Ser protein kinase. | Hypothetical protein. | 0.678 |
AGE27721.1 | AGE27722.1 | H045_18295 | H045_18300 | PrkA family serine protein kinase; COG2766 Putative Ser protein kinase. | Hypothetical protein; Belongs to the UPF0229 family. | 0.990 |
AGE27721.1 | AGE27723.1 | H045_18295 | H045_18305 | PrkA family serine protein kinase; COG2766 Putative Ser protein kinase. | SpoVR family protein. | 0.992 |
AGE27721.1 | cca | H045_18295 | H045_18310 | PrkA family serine protein kinase; COG2766 Putative Ser protein kinase. | 2',3'-cyclic phosphodiesterase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases. | 0.567 |
AGE27722.1 | AGE24417.1 | H045_18300 | H045_01705 | Hypothetical protein; Belongs to the UPF0229 family. | PhoH family protein; COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH. | 0.431 |
AGE27722.1 | AGE25094.1 | H045_18300 | H045_05090 | Hypothetical protein; Belongs to the UPF0229 family. | Hypothetical protein. | 0.426 |
AGE27722.1 | AGE27721.1 | H045_18300 | H045_18295 | Hypothetical protein; Belongs to the UPF0229 family. | PrkA family serine protein kinase; COG2766 Putative Ser protein kinase. | 0.990 |
AGE27722.1 | AGE27723.1 | H045_18300 | H045_18305 | Hypothetical protein; Belongs to the UPF0229 family. | SpoVR family protein. | 0.995 |
AGE27722.1 | cca | H045_18300 | H045_18310 | Hypothetical protein; Belongs to the UPF0229 family. | 2',3'-cyclic phosphodiesterase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases. | 0.633 |
AGE27723.1 | AGE25094.1 | H045_18305 | H045_05090 | SpoVR family protein. | Hypothetical protein. | 0.465 |
AGE27723.1 | AGE27721.1 | H045_18305 | H045_18295 | SpoVR family protein. | PrkA family serine protein kinase; COG2766 Putative Ser protein kinase. | 0.992 |
AGE27723.1 | AGE27722.1 | H045_18305 | H045_18300 | SpoVR family protein. | Hypothetical protein; Belongs to the UPF0229 family. | 0.995 |
AGE27723.1 | cca | H045_18305 | H045_18310 | SpoVR family protein. | 2',3'-cyclic phosphodiesterase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases. | 0.636 |
cca | AGE27721.1 | H045_18310 | H045_18295 | 2',3'-cyclic phosphodiesterase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases. | PrkA family serine protein kinase; COG2766 Putative Ser protein kinase. | 0.567 |
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