STRINGSTRING
AGE27733.1 AGE27733.1 AGE28003.1 AGE28003.1 AGE26439.1 AGE26439.1 AGE26823.1 AGE26823.1 AGE27534.1 AGE27534.1 AGE27735.1 AGE27735.1 putA putA gltB gltB AGE27734.1 AGE27734.1 AGE27732.1 AGE27732.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE27733.1COG1522 Transcriptional regulators. (148 aa)    
Predicted Functional Partners:
AGE28003.1
COG1522 Transcriptional regulators.
  
  
 0.768
AGE26439.1
COG1522 Transcriptional regulators.
  
     0.761
AGE26823.1
Putative leucine-responsive regulatory protein; COG1522 Transcriptional regulators.
  
     0.757
AGE27534.1
COG1522 Transcriptional regulators.
  
     0.748
AGE27735.1
COG0388 Predicted amidohydrolase.
 
     0.539
putA
Trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.535
gltB
COG0067 Glutamate synthase domain 1.
     
 0.529
AGE27734.1
Amine oxidase, flavin-containing; COG1231 Monoamine oxidase.
       0.501
AGE27732.1
Sensory box-containing diguanylate cyclase; COG2202 FOG: PAS/PAC domain.
       0.417
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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