STRINGSTRING
AGE27766.1 AGE27766.1 AGE27765.1 AGE27765.1 AGE27767.1 AGE27767.1 AGE26455.1 AGE26455.1 AGE25264.1 AGE25264.1 AGE27768.1 AGE27768.1 AGE27764.1 AGE27764.1 AGE27763.1 AGE27763.1 AGE28812.1 AGE28812.1 AGE24508.1 AGE24508.1 AGE24510.1 AGE24510.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE27766.1Hypothetical protein; COG3182 Uncharacterized iron-regulated membrane protein. (367 aa)    
Predicted Functional Partners:
AGE27765.1
TonB-dependent siderophore receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.818
AGE27767.1
Hypothetical protein.
  
    0.806
AGE26455.1
TonB-dependent ferric achromobactin receptor protein; COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.778
AGE25264.1
TonB-dependent siderophore receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.718
AGE27768.1
COG0625 Glutathione S-transferase.
       0.595
AGE27764.1
Sigma factor regulatory protein, FecR/PupR family; COG3712 Fe2+-dicitrate sensor, membrane component.
 
   
 0.593
AGE27763.1
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
 
   
 0.551
AGE28812.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.527
AGE24508.1
Hypothetical protein.
 
    0.473
AGE24510.1
Hypothetical protein.
 
    0.459
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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