Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGE24358.1 | AGE26879.1 | H045_01410 | H045_14070 | COG3107 Putative lipoprotein. | Hypothetical protein. | 0.531 |
AGE24358.1 | AGE26880.1 | H045_01410 | H045_14075 | COG3107 Putative lipoprotein. | alpha-L-glutamate ligase-related protein; COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase). | 0.467 |
AGE24358.1 | AGE27772.1 | H045_01410 | H045_18550 | COG3107 Putative lipoprotein. | COG4067 Uncharacterized protein conserved in archaea. | 0.414 |
AGE26879.1 | AGE24358.1 | H045_14070 | H045_01410 | Hypothetical protein. | COG3107 Putative lipoprotein. | 0.531 |
AGE26879.1 | AGE26880.1 | H045_14070 | H045_14075 | Hypothetical protein. | alpha-L-glutamate ligase-related protein; COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase). | 0.958 |
AGE26879.1 | AGE27772.1 | H045_14070 | H045_18550 | Hypothetical protein. | COG4067 Uncharacterized protein conserved in archaea. | 0.748 |
AGE26880.1 | AGE24358.1 | H045_14075 | H045_01410 | alpha-L-glutamate ligase-related protein; COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase). | COG3107 Putative lipoprotein. | 0.467 |
AGE26880.1 | AGE26879.1 | H045_14075 | H045_14070 | alpha-L-glutamate ligase-related protein; COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase). | Hypothetical protein. | 0.958 |
AGE26880.1 | AGE27772.1 | H045_14075 | H045_18550 | alpha-L-glutamate ligase-related protein; COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase). | COG4067 Uncharacterized protein conserved in archaea. | 0.725 |
AGE27769.1 | AGE27770.1 | H045_18535 | H045_18540 | COG4452 Inner membrane protein involved in colicin E2 resistance. | COG0642 Signal transduction histidine kinase. | 0.936 |
AGE27769.1 | AGE27771.1 | H045_18535 | H045_18545 | COG4452 Inner membrane protein involved in colicin E2 resistance. | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.781 |
AGE27769.1 | AGE27772.1 | H045_18535 | H045_18550 | COG4452 Inner membrane protein involved in colicin E2 resistance. | COG4067 Uncharacterized protein conserved in archaea. | 0.655 |
AGE27769.1 | AGE27773.1 | H045_18535 | H045_18555 | COG4452 Inner membrane protein involved in colicin E2 resistance. | Acyltransferase; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.427 |
AGE27770.1 | AGE27769.1 | H045_18540 | H045_18535 | COG0642 Signal transduction histidine kinase. | COG4452 Inner membrane protein involved in colicin E2 resistance. | 0.936 |
AGE27770.1 | AGE27771.1 | H045_18540 | H045_18545 | COG0642 Signal transduction histidine kinase. | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.996 |
AGE27770.1 | AGE27772.1 | H045_18540 | H045_18550 | COG0642 Signal transduction histidine kinase. | COG4067 Uncharacterized protein conserved in archaea. | 0.800 |
AGE27770.1 | AGE27773.1 | H045_18540 | H045_18555 | COG0642 Signal transduction histidine kinase. | Acyltransferase; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.545 |
AGE27771.1 | AGE27769.1 | H045_18545 | H045_18535 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | COG4452 Inner membrane protein involved in colicin E2 resistance. | 0.781 |
AGE27771.1 | AGE27770.1 | H045_18545 | H045_18540 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | COG0642 Signal transduction histidine kinase. | 0.996 |
AGE27771.1 | AGE27772.1 | H045_18545 | H045_18550 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | COG4067 Uncharacterized protein conserved in archaea. | 0.800 |
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