STRINGSTRING
AGE27772.1 AGE27772.1 AGE27770.1 AGE27770.1 AGE27771.1 AGE27771.1 rimK rimK AGE26879.1 AGE26879.1 AGE26880.1 AGE26880.1 AGE27769.1 AGE27769.1 AGE27773.1 AGE27773.1 AGE24358.1 AGE24358.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE27772.1COG4067 Uncharacterized protein conserved in archaea. (166 aa)    
Predicted Functional Partners:
AGE27770.1
COG0642 Signal transduction histidine kinase.
       0.800
AGE27771.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.800
rimK
COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); Belongs to the RimK family.
 
     0.766
AGE26879.1
Hypothetical protein.
 
    0.748
AGE26880.1
alpha-L-glutamate ligase-related protein; COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase).
 
     0.725
AGE27769.1
COG4452 Inner membrane protein involved in colicin E2 resistance.
       0.655
AGE27773.1
Acyltransferase; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.548
AGE24358.1
COG3107 Putative lipoprotein.
  
   
 0.414
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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