STRINGSTRING
fdhA fdhA AGE24732.1 AGE24732.1 fghA fghA AGE27781.1 AGE27781.1 AGE27794.1 AGE27794.1 AGE27782.1 AGE27782.1 purU-2 purU-2 AGE27783.1 AGE27783.1 AGE27784.1 AGE27784.1 AGE27788.1 AGE27788.1 AGE27790.1 AGE27790.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
fdhAGlutathione-independent formaldehyde dehydrogenase; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases. (399 aa)    
Predicted Functional Partners:
AGE24732.1
COG1062 Zn-dependent alcohol dehydrogenases, class III.
  
 
0.920
fghA
Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde.
  
 
 0.917
AGE27781.1
COG4583 Sarcosine oxidase gamma subunit.
 
    0.705
AGE27794.1
Hypothetical protein.
  
  
 0.687
AGE27782.1
Sarcosine oxidase subunit alpha; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
 
  
 0.670
purU-2
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
  
    0.654
AGE27783.1
COG4311 Sarcosine oxidase delta subunit.
 
    0.631
AGE27784.1
Sarcosine oxidase subunit beta; COG0665 Glycine/D-amino acid oxidases (deaminating).
 
  
 0.620
AGE27788.1
Hybrid-cluster NAD(P)-dependent oxidoreductase; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
  
 0.603
AGE27790.1
COG2086 Electron transfer flavoprotein, beta subunit.
 
  
 0.586
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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