STRINGSTRING
betB betB betA betA AGE25336.1 AGE25336.1 betI betI fmt fmt AGE25903.1 AGE25903.1 AGE25904.1 AGE25904.1 AGE26048.1 AGE26048.1 AGE25901.1 AGE25901.1 gltB gltB AGE26721.1 AGE26721.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
betBBetaine aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid. (490 aa)    
Predicted Functional Partners:
betA
Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
 
 
 0.964
AGE25336.1
COG2303 Choline dehydrogenase and related flavoproteins.
 
 
 0.918
betI
Transcriptional regulator BetI; Repressor involved in choline regulation of the bet genes.
  
 0.832
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
    
 0.655
AGE25903.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.534
AGE25904.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.516
AGE26048.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.516
AGE25901.1
Putative non-ribosomal antibiotic-related peptide synthase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 
 0.498
gltB
COG0067 Glutamate synthase domain 1.
  
  
 0.450
AGE26721.1
Putative transmembrane two-component system, sensor kinase/regulator hybrid; COG0591 Na+/proline symporter.
  
 
 0.430
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.