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madM madM madL madL mdcC mdcC mdcE mdcE mdcA mdcA AGE27888.1 AGE27888.1 AGE27886.1 AGE27886.1 mdcB mdcB mdcH mdcH AGE27882.1 AGE27882.1 AGE24886.1 AGE24886.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
madMMalonate transporter subunit MadM; COG5564 Predicted TIM-barrel enzyme, possibly a dioxygenase. (254 aa)    
Predicted Functional Partners:
madL
Putative malonate transporter-like membrane protein.
 
   
 0.953
mdcC
Malonate decarboxylase subunit delta; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.
 
     0.878
mdcE
Malonate decarboxylase subunit gamma; COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
 
   
 0.875
mdcA
Malonate decarboxylase subunit alpha; COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase.
 
     0.872
AGE27888.1
COG0777 Acetyl-CoA carboxylase beta subunit.
 
   
 0.857
AGE27886.1
COG0438 Glycosyltransferase.
 
     0.841
mdcB
triphosphoribosyl-dephospho-CoA synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.
 
     0.832
mdcH
Putative malonyl-CoA-acyl carrier protein transacylase; COG0331 (acyl-carrier-protein) S-malonyltransferase.
 
   
 0.727
AGE27882.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.625
AGE24886.1
Family 1 extracellular solute-binding protein; COG0725 ABC-type molybdate transport system, periplasmic component.
  
     0.485
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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