STRINGSTRING
mdcA mdcA mdcE mdcE AGE27888.1 AGE27888.1 mdcH mdcH mdcC mdcC mdcB mdcB AGE27886.1 AGE27886.1 madL madL madM madM accD accD AGE27882.1 AGE27882.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdcAMalonate decarboxylase subunit alpha; COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase. (556 aa)    
Predicted Functional Partners:
mdcE
Malonate decarboxylase subunit gamma; COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
 
 0.999
AGE27888.1
COG0777 Acetyl-CoA carboxylase beta subunit.
 
 0.998
mdcH
Putative malonyl-CoA-acyl carrier protein transacylase; COG0331 (acyl-carrier-protein) S-malonyltransferase.
 
 
 0.994
mdcC
Malonate decarboxylase subunit delta; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.
 
  
 0.978
mdcB
triphosphoribosyl-dephospho-CoA synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.
  
 0.971
AGE27886.1
COG0438 Glycosyltransferase.
 
  
 0.970
madL
Putative malonate transporter-like membrane protein.
 
  
 0.886
madM
Malonate transporter subunit MadM; COG5564 Predicted TIM-barrel enzyme, possibly a dioxygenase.
 
     0.872
accD
acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
 
 0.721
AGE27882.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.703
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
Server load: low (24%) [HD]