STRINGSTRING
AGE27915.1 AGE27915.1 metW metW rdgB rdgB AGE27917.1 AGE27917.1 AGE27918.1 AGE27918.1 metX-2 metX-2 AGE26797.1 AGE26797.1 AGE28089.1 AGE28089.1 AGE27912.1 AGE27912.1 AGE28547.1 AGE28547.1 AGE26749.1 AGE26749.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE27915.1Hypothetical protein. (144 aa)    
Predicted Functional Partners:
metW
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
     0.922
rdgB
dITP/XTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
  
    0.885
AGE27917.1
HemN family oxidoreductase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
       0.800
AGE27918.1
Hypothetical protein.
       0.747
metX-2
Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.
       0.728
AGE26797.1
COG3198 Uncharacterized protein conserved in bacteria.
  
     0.679
AGE28089.1
COG3245 Cytochrome c5.
  
     0.649
AGE27912.1
YGGT family protein; COG0762 Predicted integral membrane protein.
 
     0.554
AGE28547.1
Hypothetical protein.
  
     0.553
AGE26749.1
Hypothetical protein.
  
     0.548
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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