Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGE25742.1 | AGE25743.1 | H045_08360 | H045_08365 | DNA primase. | Zinc finger CHC2-family protein; COG0358 DNA primase (bacterial type). | 0.636 |
AGE25742.1 | AGE27947.1 | H045_08360 | H045_19425 | DNA primase. | Small GTP-binding protein domain protein; COG1084 Predicted GTPase. | 0.551 |
AGE25743.1 | AGE25742.1 | H045_08365 | H045_08360 | Zinc finger CHC2-family protein; COG0358 DNA primase (bacterial type). | DNA primase. | 0.636 |
AGE25743.1 | AGE27947.1 | H045_08365 | H045_19425 | Zinc finger CHC2-family protein; COG0358 DNA primase (bacterial type). | Small GTP-binding protein domain protein; COG1084 Predicted GTPase. | 0.551 |
AGE27945.1 | AGE27946.1 | H045_19415 | H045_19420 | Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. | Hypothetical protein. | 0.589 |
AGE27945.1 | AGE27947.1 | H045_19415 | H045_19425 | Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. | Small GTP-binding protein domain protein; COG1084 Predicted GTPase. | 0.595 |
AGE27945.1 | guaA | H045_19415 | H045_16085 | Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.425 |
AGE27946.1 | AGE27945.1 | H045_19420 | H045_19415 | Hypothetical protein. | Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. | 0.589 |
AGE27946.1 | AGE27947.1 | H045_19420 | H045_19425 | Hypothetical protein. | Small GTP-binding protein domain protein; COG1084 Predicted GTPase. | 0.952 |
AGE27946.1 | AGE28722.1 | H045_19420 | H045_23320 | Hypothetical protein. | Putative lipoprotein. | 0.746 |
AGE27947.1 | AGE25742.1 | H045_19425 | H045_08360 | Small GTP-binding protein domain protein; COG1084 Predicted GTPase. | DNA primase. | 0.551 |
AGE27947.1 | AGE25743.1 | H045_19425 | H045_08365 | Small GTP-binding protein domain protein; COG1084 Predicted GTPase. | Zinc finger CHC2-family protein; COG0358 DNA primase (bacterial type). | 0.551 |
AGE27947.1 | AGE27945.1 | H045_19425 | H045_19415 | Small GTP-binding protein domain protein; COG1084 Predicted GTPase. | Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. | 0.595 |
AGE27947.1 | AGE27946.1 | H045_19425 | H045_19420 | Small GTP-binding protein domain protein; COG1084 Predicted GTPase. | Hypothetical protein. | 0.952 |
AGE27947.1 | AGE28722.1 | H045_19425 | H045_23320 | Small GTP-binding protein domain protein; COG1084 Predicted GTPase. | Putative lipoprotein. | 0.547 |
AGE27947.1 | cmk | H045_19425 | H045_04645 | Small GTP-binding protein domain protein; COG1084 Predicted GTPase. | COG0283 Cytidylate kinase. | 0.572 |
AGE27947.1 | dnaG | H045_19425 | H045_18340 | Small GTP-binding protein domain protein; COG1084 Predicted GTPase. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.551 |
AGE27947.1 | gpsA | H045_19425 | H045_05405 | Small GTP-binding protein domain protein; COG1084 Predicted GTPase. | COG0240 Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.729 |
AGE27947.1 | guaA | H045_19425 | H045_16085 | Small GTP-binding protein domain protein; COG1084 Predicted GTPase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.529 |
AGE27947.1 | typA | H045_19425 | H045_22615 | Small GTP-binding protein domain protein; COG1084 Predicted GTPase. | GTP-binding protein TypA; COG1217 Predicted membrane GTPase involved in stress response. | 0.562 |
page 1 of 2