STRINGSTRING
AGE27947.1 AGE27947.1 AGE27946.1 AGE27946.1 gpsA gpsA AGE27945.1 AGE27945.1 cmk cmk typA typA AGE25742.1 AGE25742.1 AGE25743.1 AGE25743.1 dnaG dnaG AGE28722.1 AGE28722.1 guaA guaA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
AGE27947.1Small GTP-binding protein domain protein; COG1084 Predicted GTPase. (455 aa)    
Predicted Functional Partners:
AGE27946.1
Hypothetical protein.
 
     0.952
gpsA
COG0240 Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.729
AGE27945.1
Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.
  
    0.595
cmk
COG0283 Cytidylate kinase.
  
  
 0.572
typA
GTP-binding protein TypA; COG1217 Predicted membrane GTPase involved in stress response.
  
  
 0.562
AGE25742.1
DNA primase.
  
  
 0.551
AGE25743.1
Zinc finger CHC2-family protein; COG0358 DNA primase (bacterial type).
  
  
 0.551
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
  
  
 0.551
AGE28722.1
Putative lipoprotein.
  
     0.547
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.529
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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