STRINGSTRING
AGE28008.1 AGE28008.1 AGE28007.1 AGE28007.1 AGE28006.1 AGE28006.1 AGE28005.1 AGE28005.1 AGE28009.1 AGE28009.1 AGE28792.1 AGE28792.1 AGE24678.1 AGE24678.1 AGE27310.1 AGE27310.1 AGE24865.1 AGE24865.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE28008.1Hypothetical protein; COG0209 Ribonucleotide reductase, alpha subunit. (104 aa)    
Predicted Functional Partners:
AGE28007.1
Nodulation efficiency protein D (NfeD) family protein; COG1585 Membrane protein implicated in regulation of membrane protease activity.
       0.627
AGE28006.1
Hypothetical protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
       0.617
AGE28005.1
Putative secretion-related ATP-binding protein; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
       0.489
AGE28009.1
Putative aminotransferase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
       0.473
AGE28792.1
COG2193 Bacterioferritin (cytochrome b1).
   
    0.431
AGE24678.1
Hypothetical protein.
   
    0.426
AGE27310.1
Hypothetical protein; COG3134 Predicted outer membrane lipoprotein.
   
    0.416
AGE24865.1
Sigma factor negative regulatory protein; COG3073 Negative regulator of sigma E activity.
   
    0.410
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.