Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGE28129.1 | AGE28130.1 | H045_20335 | H045_20340 | Type VI secretion-associated lipoprotein TagQ. | Type VI secretion posttranslational regulatory protein TagR. | 0.767 |
AGE28129.1 | AGE28131.1 | H045_20335 | H045_20345 | Type VI secretion-associated lipoprotein TagQ. | Putative ABC transporter membrane protein; COG0577 ABC-type antimicrobial peptide transport system, permease component. | 0.706 |
AGE28129.1 | AGE28132.1 | H045_20335 | H045_20350 | Type VI secretion-associated lipoprotein TagQ. | Putative ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component. | 0.757 |
AGE28129.1 | AGE28133.1 | H045_20335 | H045_20355 | Type VI secretion-associated lipoprotein TagQ. | COG0515 Serine/threonine protein kinase. | 0.699 |
AGE28129.1 | AGE28134.1 | H045_20335 | H045_20360 | Type VI secretion-associated lipoprotein TagQ. | Putative phosphatase; COG0631 Serine/threonine protein phosphatase. | 0.689 |
AGE28129.1 | AGE28135.1 | H045_20335 | H045_20365 | Type VI secretion-associated lipoprotein TagQ. | Type VI secretion-associated protein TagF; COG3913 Uncharacterized protein conserved in bacteria. | 0.806 |
AGE28129.1 | AGE28137.1 | H045_20335 | H045_20375 | Type VI secretion-associated lipoprotein TagQ. | COG3455 Uncharacterized protein conserved in bacteria. | 0.826 |
AGE28129.1 | AGE28138.1 | H045_20335 | H045_20380 | Type VI secretion-associated lipoprotein TagQ. | COG3522 Uncharacterized protein conserved in bacteria. | 0.698 |
AGE28129.1 | AGE28139.1 | H045_20335 | H045_20385 | Type VI secretion-associated lipoprotein TagQ. | Type VI secretion lipoprotein TssJ1; COG3521 Uncharacterized protein conserved in bacteria. | 0.606 |
AGE28129.1 | icmF | H045_20335 | H045_20370 | Type VI secretion-associated lipoprotein TagQ. | COG3523 Uncharacterized protein conserved in bacteria. | 0.655 |
AGE28130.1 | AGE28129.1 | H045_20340 | H045_20335 | Type VI secretion posttranslational regulatory protein TagR. | Type VI secretion-associated lipoprotein TagQ. | 0.767 |
AGE28130.1 | AGE28131.1 | H045_20340 | H045_20345 | Type VI secretion posttranslational regulatory protein TagR. | Putative ABC transporter membrane protein; COG0577 ABC-type antimicrobial peptide transport system, permease component. | 0.973 |
AGE28130.1 | AGE28132.1 | H045_20340 | H045_20350 | Type VI secretion posttranslational regulatory protein TagR. | Putative ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component. | 0.930 |
AGE28130.1 | AGE28133.1 | H045_20340 | H045_20355 | Type VI secretion posttranslational regulatory protein TagR. | COG0515 Serine/threonine protein kinase. | 0.944 |
AGE28130.1 | AGE28134.1 | H045_20340 | H045_20360 | Type VI secretion posttranslational regulatory protein TagR. | Putative phosphatase; COG0631 Serine/threonine protein phosphatase. | 0.839 |
AGE28130.1 | AGE28135.1 | H045_20340 | H045_20365 | Type VI secretion posttranslational regulatory protein TagR. | Type VI secretion-associated protein TagF; COG3913 Uncharacterized protein conserved in bacteria. | 0.928 |
AGE28130.1 | AGE28137.1 | H045_20340 | H045_20375 | Type VI secretion posttranslational regulatory protein TagR. | COG3455 Uncharacterized protein conserved in bacteria. | 0.888 |
AGE28130.1 | AGE28138.1 | H045_20340 | H045_20380 | Type VI secretion posttranslational regulatory protein TagR. | COG3522 Uncharacterized protein conserved in bacteria. | 0.822 |
AGE28130.1 | AGE28139.1 | H045_20340 | H045_20385 | Type VI secretion posttranslational regulatory protein TagR. | Type VI secretion lipoprotein TssJ1; COG3521 Uncharacterized protein conserved in bacteria. | 0.828 |
AGE28130.1 | icmF | H045_20340 | H045_20370 | Type VI secretion posttranslational regulatory protein TagR. | COG3523 Uncharacterized protein conserved in bacteria. | 0.850 |
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