STRINGSTRING
AGE28132.1 AGE28132.1 AGE28131.1 AGE28131.1 AGE28130.1 AGE28130.1 AGE28135.1 AGE28135.1 AGE28133.1 AGE28133.1 AGE28134.1 AGE28134.1 AGE28137.1 AGE28137.1 icmF icmF AGE28138.1 AGE28138.1 AGE28129.1 AGE28129.1 AGE28139.1 AGE28139.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGE28132.1Putative ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component. (234 aa)    
Predicted Functional Partners:
AGE28131.1
Putative ABC transporter membrane protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 
 0.948
AGE28130.1
Type VI secretion posttranslational regulatory protein TagR.
 
    0.930
AGE28135.1
Type VI secretion-associated protein TagF; COG3913 Uncharacterized protein conserved in bacteria.
  
    0.907
AGE28133.1
COG0515 Serine/threonine protein kinase.
 
  
 0.872
AGE28134.1
Putative phosphatase; COG0631 Serine/threonine protein phosphatase.
  
  
 0.848
AGE28137.1
COG3455 Uncharacterized protein conserved in bacteria.
  
    0.843
icmF
COG3523 Uncharacterized protein conserved in bacteria.
  
    0.821
AGE28138.1
COG3522 Uncharacterized protein conserved in bacteria.
  
    0.808
AGE28129.1
Type VI secretion-associated lipoprotein TagQ.
  
 
 0.757
AGE28139.1
Type VI secretion lipoprotein TssJ1; COG3521 Uncharacterized protein conserved in bacteria.
  
    0.757
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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